Package: bbsBayes2 1.1.2.1
Brandon P.M. Edwards
bbsBayes2: Hierarchical Bayesian Analysis of North American BBS Data
The North American Breeding Bird Survey (BBS) is a long-running program that seeks to monitor the status and trends of the breeding birds in North America. Since its start in 1966, the BBS has accumulated over 50 years of data for over 500 species of North American Birds. Given the temporal and spatial structure of the data, hierarchical Bayesian models are used to assess the status and trends of these 500+ species of birds. 'bbsBayes2' allows you to perform hierarchical Bayesian analysis of BBS data. You can run a full model analysis for one or more species that you choose, or you can take more control and specify how the data should be stratified, prepared for 'Stan', or modelled.
Authors:
bbsBayes2_1.1.2.1.tar.gz
bbsBayes2_1.1.2.1.zip(r-4.5)bbsBayes2_1.1.2.1.zip(r-4.4)bbsBayes2_1.1.2.1.zip(r-4.3)
bbsBayes2_1.1.2.1.tgz(r-4.4-any)bbsBayes2_1.1.2.1.tgz(r-4.3-any)
bbsBayes2_1.1.2.1.tar.gz(r-4.5-noble)bbsBayes2_1.1.2.1.tar.gz(r-4.4-noble)
bbsBayes2_1.1.2.1.tgz(r-4.4-emscripten)bbsBayes2_1.1.2.1.tgz(r-4.3-emscripten)
bbsBayes2.pdf |bbsBayes2.html✨
bbsBayes2/json (API)
NEWS
| # Install 'bbsBayes2' in R: |
| install.packages('bbsBayes2', repos = c('https://bbsbayes.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bbsbayes/bbsbayes2/issues
- bbs_data_sample - Sample BBS data
- bbs_models - Stan models included in bbsBayes2
- bbs_strata - List of included strata
- equal_area_crs - Equal_area_crs
- pacific_wren_model - Example model output
- species_forms - Species forms
- species_notes - Species notes
Last updated 1 months agofrom:3c53b41f78. Checks:OK: 1 ERROR: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 10 2024 |
| R-4.5-win | ERROR | Nov 10 2024 |
| R-4.5-linux | ERROR | Nov 10 2024 |
| R-4.4-win | ERROR | Nov 10 2024 |
| R-4.4-mac | ERROR | Nov 10 2024 |
| R-4.3-win | ERROR | Nov 10 2024 |
| R-4.3-mac | ERROR | Nov 10 2024 |
Exports:%>%assign_prov_statecopy_model_filefetch_bbs_datagenerate_indicesgenerate_trendsget_convergenceget_model_varsget_summaryhave_bbs_datahave_cmdstanload_bbs_dataload_mapplot_geofacetplot_indicesplot_mapprepare_dataprepare_modelprepare_spatialremove_cacherun_modelsave_model_runsearch_speciesstratify
Dependencies:abindaskpassassertthatbackportsbitbit64bootcheckmateclassclassIntclicliprcolorspacecpp11crayoncurlDBIdeldirdistributionaldplyre1071fansifarverfilelockgenericsgeofacetgeogridggplot2ggrepelgluegridExtragtableHDIntervalhmshttrimguRisobandjpegjsonliteKernSmoothkeyringlabelinglatticelifecyclemagrittrMASSMatrixmatrixStatsmgcvmimemunsellnlmenumDerivopensslpillarpkgconfigpngposteriorprettyunitsprogressproxypurrrR6rappdirsRColorBrewerRcppRcppArmadilloreadrrlangrnaturalearths2sbtoolsscalessfsnakecasesodiumspspDataspdepstringistringrsystensorAterratibbletidyrtidyselecttzdbunitsutf8vctrsviridisLitevroomwithrwkyaml
